1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G06390

AT3G06390


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0000438 (SeedPlants) Phylogenetic Tree(s): OG_06_0000438_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G06390
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.04 Archaeplastida
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.02 Archaeplastida
AMTR_s00016p00177260 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.06 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.02 Archaeplastida
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.03 Archaeplastida
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.04 Archaeplastida
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.09 Archaeplastida
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.06 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.07 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.15 Archaeplastida
GSVIVT01036085001 No alias Casparian strip membrane protein 2 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.15 Archaeplastida
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
Gb_12158 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26811 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os04g38690.1 No alias Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.06 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os05g15630.1 No alias CASP-like protein BLE3 OS=Oryza sativa subsp. indica... 0.08 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os12g41690.1 No alias CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.06 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
MA_3155878g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.06 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
MA_64798g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.05 Archaeplastida
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.07 Archaeplastida
MA_90653g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.06 Archaeplastida
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Pp3c4_1550V3.1 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
Solyc01g067300.3.1 No alias CASP-like protein 1D1 OS=Populus trichocarpa... 0.04 Archaeplastida
Solyc02g067190.4.1 No alias Casparian strip membrane protein 1 OS=Solanum tuberosum... 0.06 Archaeplastida
Solyc02g069730.3.1 No alias CASP-like protein 1B1 OS=Ricinus communis... 0.14 Archaeplastida
Solyc04g005620.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.04 Archaeplastida
Solyc06g074230.3.1 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.03 Archaeplastida
Solyc10g083250.2.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e003216_P001 No alias CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.08 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.05 Archaeplastida
Zm00001e015806_P001 No alias Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.09 Archaeplastida
Zm00001e024279_P001 No alias Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.07 Archaeplastida
Zm00001e026902_P001 No alias CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.14 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009561 megagametogenesis IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0047617 acyl-CoA hydrolase activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 34 184
No external refs found!