AT3G06420 (ATG8H)

Aliases : ATG8H

Description : Ubiquitin-like superfamily protein

Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0010026 (LandPlants) Phylogenetic Tree(s): OG_05_0010026_tree ,
OG_06_0010821 (SeedPlants) Phylogenetic Tree(s): OG_06_0010821_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G06420
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00225880	evm_27.TU.AmTr_v1...	Vesicle trafficking.autophagosome formation.ATG8/ATG12...	0.03	Archaeplastida
LOC_Os07g32800.2	No alias	ATG8 autophagosome ubiquitin-fold protein	0.05	Archaeplastida
MA_10426292g0030	No alias	ATG8 autophagosome ubiquitin-fold protein	0.02	Archaeplastida
Solyc08g078820.3.1	No alias	ATG8 autophagosome ubiquitin-fold protein	0.03	Archaeplastida
Zm00001e021618_P001	No alias	ATG8 autophagosome ubiquitin-fold protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006914	autophagy	ISS	Interproscan
MF	GO:0008017	microtubule binding	ISS	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046482	para-aminobenzoic acid metabolic process	RCA	Interproscan
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
MF	GO:0004096	catalase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005775	vacuolar lumen	IEP	Neighborhood
CC	GO:0005776	autophagosome	IEP	Neighborhood
CC	GO:0005777	peroxisome	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009268	response to pH	IEP	Neighborhood
BP	GO:0009404	toxin metabolic process	IEP	Neighborhood
BP	GO:0009407	toxin catabolic process	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009414	response to water deprivation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009646	response to absence of light	IEP	Neighborhood
BP	GO:0009694	jasmonic acid metabolic process	IEP	Neighborhood
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009723	response to ethylene	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009830	cell wall modification involved in abscission	IEP	Neighborhood
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009970	cellular response to sulfate starvation	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010118	stomatal movement	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
BP	GO:0010260	animal organ senescence	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0015690	aluminum cation transport	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
MF	GO:0019776	Atg8 ligase activity	IEP	Neighborhood
MF	GO:0019779	Atg8 activating enzyme activity	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0019786	Atg8-specific protease activity	IEP	Neighborhood
BP	GO:0022411	cellular component disassembly	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
CC	GO:0042579	microbody	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0042631	cellular response to water deprivation	IEP	Neighborhood
BP	GO:0043562	cellular response to nitrogen levels	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044277	cell wall disassembly	IEP	Neighborhood
BP	GO:0045037	protein import into chloroplast stroma	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
MF	GO:0050897	cobalt ion binding	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071462	cellular response to water stimulus	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072512	trivalent inorganic cation transport	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
BP	GO:0098754	detoxification	IEP	Neighborhood
BP	GO:0104004	cellular response to environmental stimulus	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004241	Atg8-like	16	119

External Links

No external refs found!

AT3G06420 (ATG8H)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation