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  5. Zm00001e000106_P001

Zm00001e000106_P001


Description : Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana (sp|q9scp4|pp279_arath : 518.0)


Gene families : OG0000306 (Archaeplastida) Phylogenetic Tree(s): OG0000306_tree ,
OG_05_0001965 (LandPlants) Phylogenetic Tree(s): OG_05_0001965_tree ,
OG_06_0003421 (SeedPlants) Phylogenetic Tree(s): OG_06_0003421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000106_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G39620 EMB2453, ATPPR5 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01017677001 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.02 Archaeplastida
Gb_00230 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.01 Archaeplastida
LOC_Os03g02430.1 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.06 Archaeplastida
LOC_Os06g07550.1 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.05 Archaeplastida
Solyc01g057200.4.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.02 Archaeplastida
Solyc04g054270.4.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 232 261
IPR002885 Pentatricopeptide_repeat 407 452
IPR002885 Pentatricopeptide_repeat 162 208
IPR002885 Pentatricopeptide_repeat 265 313
IPR002885 Pentatricopeptide_repeat 335 384
No external refs found!