Description : cyclin (CYCT). regulatory component of CTDK-I polymerase-II kinase complex
Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0001681 (LandPlants) Phylogenetic Tree(s): OG_05_0001681_tree ,
OG_06_0001929 (SeedPlants) Phylogenetic Tree(s): OG_06_0001929_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e000132_P005 | |
Cluster | HCCA: Cluster_341 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre14.g613900 | No alias | Cell cycle.regulation.cyclins.CYCT-type cyclin | 0.03 | Archaeplastida | |
GSVIVT01020280001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
GSVIVT01020870001 | No alias | Cell cycle.regulation.cyclins.CYCL-type cyclin | 0.04 | Archaeplastida | |
LOC_Os12g30020.2 | No alias | cyclin (CYCT). regulatory component of CTDK-I... | 0.02 | Archaeplastida | |
MA_101777g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_8507811g0010 | No alias | cyclin (CYCT) | 0.03 | Archaeplastida | |
Mp3g00720.1 | No alias | cyclin (CYCT). regulatory component of CTDK-I... | 0.02 | Archaeplastida | |
Pp3c2_24723V3.1 | No alias | Cyclin family protein | 0.03 | Archaeplastida | |
Pp3c7_14590V3.1 | No alias | Cyclin family protein | 0.02 | Archaeplastida | |
Pp3c9_26180V3.1 | No alias | arginine-rich cyclin 1 | 0.03 | Archaeplastida | |
Zm00001e033879_P003 | No alias | cyclin (CYCT). regulatory component of CTDK-I... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0070566 | adenylyltransferase activity | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006671 | Cyclin_N | 51 | 191 |
No external refs found! |