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  5. Zm00001e000163_P001

Zm00001e000163_P001


Description : component psRPL11 of large ribosomal subunit proteome


Gene families : OG0006029 (Archaeplastida) Phylogenetic Tree(s): OG0006029_tree ,
OG_05_0005977 (LandPlants) Phylogenetic Tree(s): OG_05_0005977_tree ,
OG_06_0008850 (SeedPlants) Phylogenetic Tree(s): OG_06_0008850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000163_P001
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272010 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT1G32990 PRPL11 plastid ribosomal protein l11 0.32 Archaeplastida
Cre10.g423650 No alias Protein biosynthesis.organelle translation... 0.18 Archaeplastida
GSVIVT01019689001 No alias Protein biosynthesis.organelle translation... 0.21 Archaeplastida
Gb_12514 No alias component psRPL11 of large ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os03g03020.1 No alias component psRPL11 of large ribosomal subunit proteome 0.35 Archaeplastida
MA_26087g0010 No alias 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
MA_368887g0010 No alias 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.06 Archaeplastida
Mp7g12110.1 No alias component psRPL11 of large ribosomal subunit proteome 0.3 Archaeplastida
Pp3c10_12450V3.1 No alias plastid ribosomal protein l11 0.22 Archaeplastida
Pp3c12_19370V3.1 No alias plastid ribosomal protein l11 0.18 Archaeplastida
Pp3c3_20370V3.1 No alias plastid ribosomal protein l11 0.1 Archaeplastida
Smo230830 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc08g083350.4.1 No alias component psRPL11 of large ribosomal subunit proteome 0.27 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 67 131
IPR020783 Ribosomal_L11_C 136 204
No external refs found!