Description : component RPL21 of LSU proteome component
Gene families : OG0001742 (Archaeplastida) Phylogenetic Tree(s): OG0001742_tree ,
OG_05_0002541 (LandPlants) Phylogenetic Tree(s): OG_05_0002541_tree ,
OG_06_0002619 (SeedPlants) Phylogenetic Tree(s): OG_06_0002619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e000341_P001 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00252940 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
AMTR_s00024p00178920 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
AT1G09590 | No alias | Translation protein SH3-like family protein | 0.36 | Archaeplastida | |
AT1G09690 | No alias | Translation protein SH3-like family protein | 0.29 | Archaeplastida | |
AT1G57660 | No alias | Translation protein SH3-like family protein | 0.08 | Archaeplastida | |
Cpa|evm.model.tig00000640.5 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
Cre06.g278135 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.36 | Archaeplastida | |
GSVIVT01001130001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | Archaeplastida | |
GSVIVT01033444001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | Archaeplastida | |
GSVIVT01033455001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
Gb_09077 | No alias | component RPL21 of LSU proteome component | 0.09 | Archaeplastida | |
LOC_Os03g04750.1 | No alias | component RPL21 of LSU proteome component | 0.29 | Archaeplastida | |
LOC_Os10g32820.1 | No alias | component RPL21 of LSU proteome component | 0.17 | Archaeplastida | |
MA_186351g0010 | No alias | component RPL21 of LSU proteome component | 0.02 | Archaeplastida | |
MA_40819g0010 | No alias | component RPL21 of LSU proteome component | 0.04 | Archaeplastida | |
Mp6g01390.1 | No alias | component RPL21 of LSU proteome component | 0.27 | Archaeplastida | |
Pp3c12_9320V3.1 | No alias | Translation protein SH3-like family protein | 0.34 | Archaeplastida | |
Pp3c13_2360V3.1 | No alias | Translation protein SH3-like family protein | 0.21 | Archaeplastida | |
Pp3c3_5550V3.1 | No alias | Translation protein SH3-like family protein | 0.26 | Archaeplastida | |
Pp3c4_21520V3.1 | No alias | Translation protein SH3-like family protein | 0.27 | Archaeplastida | |
Smo170832 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | Archaeplastida | |
Solyc10g078960.2.1 | No alias | component RPL21 of LSU proteome component | 0.27 | Archaeplastida | |
Solyc10g080590.2.1 | No alias | component RPL21 of LSU proteome component | 0.2 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001147 | Ribosomal_L21e | 1 | 101 |
No external refs found! |