AT1G12210 (RFL1)

Aliases : RFL1

Description : RPS5-like 1

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12210
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.04	Archaeplastida
AMTR_s00009p00126150	evm_27.TU.AmTr_v1...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00009p00245910	evm_27.TU.AmTr_v1...	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00029p00113270	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AMTR_s00050p00210650	evm_27.TU.AmTr_v1...	Putative disease resistance protein At1g63350...	0.03	Archaeplastida
AMTR_s00078p00177570	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00099p00016360	evm_27.TU.AmTr_v1...	No description available	0.08	Archaeplastida
AMTR_s00101p00133980	evm_27.TU.AmTr_v1...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.04	Archaeplastida
AMTR_s00771p00010380	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AT1G12220	RPS5	Disease resistance protein (CC-NBS-LRR class) family	0.07	Archaeplastida
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	Archaeplastida
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	Archaeplastida
AT1G61180	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Archaeplastida
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	Archaeplastida
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	Archaeplastida
AT4G27190	No alias	NB-ARC domain-containing disease resistance protein	0.05	Archaeplastida
AT5G43730	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	Archaeplastida
AT5G63020	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.07	Archaeplastida
GSVIVT01015167001	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.06	Archaeplastida
GSVIVT01017020001	No alias	Probable disease resistance protein At5g63020...	0.03	Archaeplastida
GSVIVT01017227001	No alias	No description available	0.03	Archaeplastida
GSVIVT01017232001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.04	Archaeplastida
Gb_01077	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_12853	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_18201	No alias	Probable disease resistance protein At1g61180...	0.03	Archaeplastida
Gb_22529	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os01g57870.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g72680.1	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10436967g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_162415g0010	No alias	Probable disease resistance protein At1g61310...	0.03	Archaeplastida
MA_23524g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_421862g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5730007g0010	No alias	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_77943g0010	No alias	Putative disease resistance protein At4g10780...	0.03	Archaeplastida
MA_834155g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_91246g0010	No alias	Probable disease resistance protein At1g61190...	0.03	Archaeplastida
Solyc08g007250.3.1	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.04	Archaeplastida
Solyc08g013970.3.1	No alias	Probable disease resistance protein At4g27220...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006499	N-terminal protein myristoylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002218	activation of innate immune response	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0002253	activation of immune response	IEP	Neighborhood
MF	GO:0004407	histone deacetylase activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009870	defense response signaling pathway, resistance gene-dependent	IEP	Neighborhood
CC	GO:0012505	endomembrane system	IEP	Neighborhood
MF	GO:0015386	potassium:proton antiporter activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0019213	deacetylase activity	IEP	Neighborhood
MF	GO:0022821	potassium ion antiporter activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0033558	protein deacetylase activity	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
BP	GO:0042946	glucoside transport	IEP	Neighborhood
MF	GO:0042947	glucoside transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
BP	GO:1901656	glycoside transport	IEP	Neighborhood
MF	GO:1902417	(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	IEP	Neighborhood
BP	GO:1902418	(+)-abscisic acid D-glucopyranosyl ester transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	161	400
IPR001611	Leu-rich_rpt	540	599

External Links

No external refs found!

AT1G12210 (RFL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation