AT3G07040 (RPM1, RPS3)

Aliases : RPM1, RPS3

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07040
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00074p00193280	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00090p00088070	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00090p00137350	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00190p00027950	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00190p00029950	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s02154p00002280	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.08	Archaeplastida
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.09	Archaeplastida
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.18	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.21	Archaeplastida
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	Archaeplastida
AT1G58807	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Archaeplastida
AT1G58848	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G59124	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Archaeplastida
AT1G59218	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.09	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.09	Archaeplastida
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	Archaeplastida
AT5G48620	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.1	Archaeplastida
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.07	Archaeplastida
GSVIVT01026740001	No alias	Putative disease resistance protein At1g50180...	0.04	Archaeplastida
GSVIVT01026742001	No alias	Putative disease resistance protein At1g50180...	0.07	Archaeplastida
GSVIVT01026745001	No alias	Putative disease resistance protein At1g50180...	0.06	Archaeplastida
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.07	Archaeplastida
GSVIVT01026750001	No alias	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.04	Archaeplastida
Gb_25815	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	Archaeplastida
Gb_26475	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	Archaeplastida
Gb_37038	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_40379	No alias	Putative disease resistance protein At1g58400...	0.04	Archaeplastida
Gb_40740	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	Archaeplastida
LOC_Os01g33810.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os09g30230.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os11g12050.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os11g12350.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10435230g0010	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.03	Archaeplastida
Solyc02g084890.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.02	Archaeplastida
Solyc04g009690.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Zm00001e039751_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0006952	defense response	TAS	Interproscan
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	host programmed cell death induced by symbiont	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
MF	GO:0004445	inositol-polyphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
BP	GO:0015804	neutral amino acid transport	IEP	Neighborhood
BP	GO:0015824	proline transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033037	polysaccharide localization	IEP	Neighborhood
BP	GO:0036293	response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043647	inositol phosphate metabolic process	IEP	Neighborhood
MF	GO:0046030	inositol trisphosphate phosphatase activity	IEP	Neighborhood
BP	GO:0046164	alcohol catabolic process	IEP	Neighborhood
BP	GO:0046174	polyol catabolic process	IEP	Neighborhood
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Neighborhood
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0052542	defense response by callose deposition	IEP	Neighborhood
BP	GO:0052545	callose localization	IEP	Neighborhood
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0070482	response to oxygen levels	IEP	Neighborhood
BP	GO:0071453	cellular response to oxygen levels	IEP	Neighborhood
BP	GO:0071456	cellular response to hypoxia	IEP	Neighborhood
BP	GO:0071545	inositol phosphate catabolic process	IEP	Neighborhood
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	177	425

External Links

No external refs found!

AT3G07040 (RPM1, RPS3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation