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  5. Zm00001e000673_P001

Zm00001e000673_P001


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000673_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00227570 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
AMTR_s00108p00135260 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
AT1G16920 ATRABA1B, RAB11, RABA1b RAB GTPase homolog A1B 0.03 Archaeplastida
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.05 Archaeplastida
GSVIVT01014181001 No alias Ras-related protein RIC2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01021253001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
GSVIVT01027396001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
Gb_03447 No alias A-class RAB GTPase 0.03 Archaeplastida
Gb_12544 No alias A-class RAB GTPase 0.03 Archaeplastida
Gb_23200 No alias A-class RAB GTPase 0.04 Archaeplastida
LOC_Os01g54590.1 No alias A-class RAB GTPase 0.05 Archaeplastida
LOC_Os03g60870.1 No alias A-class RAB GTPase 0.05 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.05 Archaeplastida
LOC_Os05g20050.1 No alias A-class RAB GTPase 0.05 Archaeplastida
LOC_Os05g44070.1 No alias A-class RAB GTPase 0.04 Archaeplastida
MA_10428137g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
MA_10430522g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
MA_109703g0010 No alias A-class RAB GTPase 0.02 Archaeplastida
MA_177507g0010 No alias Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii... 0.03 Archaeplastida
Solyc01g096220.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc03g064020.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc03g118820.4.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc11g010100.2.1 No alias A-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!