AT1G12220 (RPS5)


Aliases : RPS5

Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12220
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 Archaeplastida
AMTR_s00009p00126150 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00009p00261740 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.04 Archaeplastida
AMTR_s00056p00141280 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 Archaeplastida
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.04 Archaeplastida
AMTR_s00078p00177570 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00078p00178290 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00101p00133980 evm_27.TU.AmTr_v1... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.02 Archaeplastida
AMTR_s00142p00041790 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G12210 RFL1 RPS5-like 1 0.07 Archaeplastida
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.08 Archaeplastida
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.1 Archaeplastida
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.08 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.09 Archaeplastida
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.09 Archaeplastida
AT5G43740 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT5G47250 No alias LRR and NB-ARC domains-containing disease resistance protein 0.06 Archaeplastida
AT5G47260 No alias ATP binding;GTP binding;nucleotide... 0.06 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01017020001 No alias Probable disease resistance protein At5g63020... 0.04 Archaeplastida
GSVIVT01017227001 No alias No description available 0.04 Archaeplastida
GSVIVT01017232001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01034252001 No alias Probable disease resistance protein At1g61300... 0.05 Archaeplastida
GSVIVT01038404001 No alias Probable disease resistance protein At1g12290... 0.06 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os01g57870.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10436071g0020 No alias Probable disease resistance protein At4g27220... 0.04 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.04 Archaeplastida
MA_23524g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_5730007g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g013970.3.1 No alias Probable disease resistance protein At4g27220... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IMP Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005622 intracellular ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006499 N-terminal protein myristoylation IDA Interproscan
BP GO:0006952 defense response IMP Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0008219 cell death IMP Interproscan
BP GO:0009626 plant-type hypersensitive response IMP Interproscan
BP GO:0009816 defense response to bacterium, incompatible interaction IDA Interproscan
MF GO:0038023 signaling receptor activity IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009835 fruit ripening IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
BP GO:0010483 pollen tube reception IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0042126 nitrate metabolic process IEP Neighborhood
BP GO:0042128 nitrate assimilation IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0051703 intraspecies interaction between organisms IEP Neighborhood
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:2001057 reactive nitrogen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 541 597
IPR002182 NB-ARC 161 402
No external refs found!