AT3G07250

Description : nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein

Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0048033 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042888 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07250

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e035497_P008	No alias	mRNA endoribonuclease (G3BP)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0030054	cell junction	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012463	Ninja_motif	12	41
IPR000504	RRM_dom	552	610
IPR000504	RRM_dom	1078	1134
IPR000504	RRM_dom	747	800
IPR000504	RRM_dom	1199	1254
IPR032308	Jas	219	280
IPR002075	NTF2	947	1060
IPR002075	NTF2	281	394

External Links

No external refs found!

AT3G07250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation