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Description : Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana (sp|p0c8q6|pp368_arath : 483.0)
Gene families : OG0010505 (Archaeplastida) Phylogenetic Tree(s): OG0010505_tree ,
OG_05_0010499 (LandPlants) Phylogenetic Tree(s): OG_05_0010499_tree ,
OG_06_0009831 (SeedPlants) Phylogenetic Tree(s): OG_06_0009831_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e000884_P001 | |
| Cluster | HCCA: Cluster_229 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00088p00119450 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| AT5G08310 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.13 | Archaeplastida | |
| GSVIVT01026178001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | Archaeplastida | |
| Gb_10306 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| LOC_Os05g24930.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
| MA_10426691g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| Solyc04g009220.2.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 386 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 236 |
| IPR002885 | Pentatricopeptide_repeat | 439 | 468 |
| IPR002885 | Pentatricopeptide_repeat | 246 | 270 |
| IPR002885 | Pentatricopeptide_repeat | 680 | 729 |
| IPR002885 | Pentatricopeptide_repeat | 475 | 519 |
| IPR002885 | Pentatricopeptide_repeat | 610 | 659 |
| IPR002885 | Pentatricopeptide_repeat | 312 | 358 |
| IPR002885 | Pentatricopeptide_repeat | 167 | 198 |
| IPR002885 | Pentatricopeptide_repeat | 273 | 303 |
| IPR002885 | Pentatricopeptide_repeat | 572 | 600 |
| No external refs found! |