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  5. Zm00001e001202_P001

Zm00001e001202_P001


Description : E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana (sp|q940t5|rduf2_arath : 187.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0004757 (LandPlants) Phylogenetic Tree(s): OG_05_0004757_tree ,
OG_06_0002639 (SeedPlants) Phylogenetic Tree(s): OG_06_0002639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001202_P001
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
AT3G13228 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G20910 AIP2 RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000158.69 No alias No description available 0.02 Archaeplastida
GSVIVT01022973001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_26865 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28802 No alias E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g52870.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.04 Archaeplastida
LOC_Os03g16480.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.03 Archaeplastida
LOC_Os06g01200.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 Archaeplastida
LOC_Os06g42700.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g36170.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g37230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_77269g0010 No alias E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... 0.03 Archaeplastida
Mp3g17850.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
Mp7g04520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Smo8109 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e038493_P001 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 134 176
IPR010543 DUF1117 192 274
No external refs found!