Zm00001e001226_P001

Description : E3 ubiquitin ligase (PUB)

Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0001036 (SeedPlants) Phylogenetic Tree(s): OG_06_0001036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e001226_P001

Target	Alias	Description	ECC score	Gene Family Method
Gb_08792	No alias	U-box domain-containing protein 1 OS=Medicago truncatula...	0.02	Archaeplastida
Gb_10627	No alias	U-box domain-containing protein 13 OS=Arabidopsis...	0.01	Archaeplastida
Gb_29276	No alias	E3 ubiquitin ligase (PUB)	0.01	Archaeplastida
LOC_Os02g49950.1	No alias	E3 ubiquitin ligase (PUB)	0.06	Archaeplastida
LOC_Os03g16824.1	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
LOC_Os06g01304.1	No alias	E3 ubiquitin ligase (PUB)	0.01	Archaeplastida
LOC_Os12g38210.1	No alias	E3 ubiquitin ligase (PUB)	0.01	Archaeplastida
MA_27512g0010	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	359	429
IPR000225	Armadillo	485	523
IPR000225	Armadillo	567	605

External Links

No external refs found!