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  5. Zm00001e001242_P002

Zm00001e001242_P002


Description : UDP-L-rhamnose synthase


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0001833 (LandPlants) Phylogenetic Tree(s): OG_05_0001833_tree ,
OG_06_0003198 (SeedPlants) Phylogenetic Tree(s): OG_06_0003198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001242_P002
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT1G53500 ATRHM2, RHM2,... NAD-dependent epimerase/dehydratase family protein 0.1 Archaeplastida
Cre02.g083800 No alias Trifunctional UDP-glucose... 0.02 Archaeplastida
GSVIVT01014091001 No alias Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Pp3c5_10340V3.1 No alias rhamnose biosynthesis 1 0.02 Archaeplastida
Solyc08g069110.3.1 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080009 mRNA methylation IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 429 601
IPR016040 NAD(P)-bd_dom 53 358
No external refs found!