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  5. Zm00001e001409_P001

Zm00001e001409_P001


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0009184 (SeedPlants) Phylogenetic Tree(s): OG_06_0009184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001409_P001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00224180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00079p00143780 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.03 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.05 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.02 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.02 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01012777001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016767001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g63680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g37690.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10432903g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2026g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_355131g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37851g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_51173g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_62361g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_948059g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c19_20750V3.1 No alias myb domain protein 20 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g009070.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR010588 Myb-rel_proteinP_C 131 290
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!