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  5. AT1G12280

AT1G12280


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12280
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.03 Archaeplastida
AMTR_s00009p00126150 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00009p00245910 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.04 Archaeplastida
AMTR_s00062p00066650 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00062p00146080 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 Archaeplastida
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.04 Archaeplastida
AMTR_s00078p00177570 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00101p00133980 evm_27.TU.AmTr_v1... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.08 Archaeplastida
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.08 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.08 Archaeplastida
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 Archaeplastida
AT1G63360 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 Archaeplastida
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017020001 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
GSVIVT01017023001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017227001 No alias No description available 0.03 Archaeplastida
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.05 Archaeplastida
GSVIVT01038404001 No alias Probable disease resistance protein At1g12290... 0.05 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12854 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
LOC_Os01g57870.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g72680.1 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g36410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g10410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.07 Archaeplastida
MA_5730007g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_781140g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_91465g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e001078_P001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response IGI Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
MF GO:0043425 bHLH transcription factor binding IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 539 598
IPR002182 NB-ARC 160 401
No external refs found!