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Description : no hits & (original description: none)
Gene families : OG0002503 (Archaeplastida) Phylogenetic Tree(s): OG0002503_tree ,
OG_05_0002298 (LandPlants) Phylogenetic Tree(s): OG_05_0002298_tree ,
OG_06_0007828 (SeedPlants) Phylogenetic Tree(s): OG_06_0007828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e001458_P002 | |
| Cluster | HCCA: Cluster_363 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G58040 | FIP1[V],... | homolog of yeast FIP1 [V] | 0.03 | Archaeplastida | |
| Cre17.g745547 | No alias | No description available | 0.02 | Archaeplastida | |
| LOC_Os03g19570.1 | No alias | FIP1[V]-like protein OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| MA_101689g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Smo441074 | No alias | FIP1[V]-like protein OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc07g005320.3.1 | No alias | component Fip1 of Cleavage and Polyadenylation... | 0.03 | Archaeplastida | |
| Solyc12g099280.2.1 | No alias | FIP1[V]-like protein OS=Arabidopsis thaliana... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007854 | Fip1 | 182 | 224 |
| No external refs found! |