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  5. Zm00001e001526_P001

Zm00001e001526_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001526_P001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.06 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.1 Archaeplastida
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_06138 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_13931 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_38388 No alias PHR1 transcription factor involved in proline synthesis... 0.04 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os07g48596.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g008200.3.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e013199_P003 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e018018_P002 No alias G2-like GARP transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 156 202
IPR001005 SANT/Myb 56 107
No external refs found!