AT3G07880 (SCN1)

Aliases : SCN1

Description : Immunoglobulin E-set superfamily protein

Gene families : OG0001502 (Archaeplastida) Phylogenetic Tree(s): OG0001502_tree ,
OG_05_0001033 (LandPlants) Phylogenetic Tree(s): OG_05_0001033_tree ,
OG_06_0001602 (SeedPlants) Phylogenetic Tree(s): OG_06_0001602_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07880
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00173830	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.01	Archaeplastida
AT1G12070	No alias	Immunoglobulin E-set superfamily protein	0.01	Archaeplastida
LOC_Os02g48730.1	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.01	Archaeplastida
MA_205752g0010	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	Archaeplastida
Solyc11g012270.2.1	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.04	Archaeplastida
Zm00001e027138_P001	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	Archaeplastida
Zm00001e027139_P001	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	Archaeplastida
Zm00001e031533_P001	No alias	guanine nucleotide dissociation inhibitor (RopGDI)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	None	Extended
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISS	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0007015	actin filament organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009932	cell tip growth	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	IMP	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
CC	GO:0005829	cytosol	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0010208	pollen wall assembly	IEP	Neighborhood
BP	GO:0010584	pollen exine formation	IEP	Neighborhood
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
BP	GO:0043085	positive regulation of catalytic activity	IEP	Neighborhood
BP	GO:0044093	positive regulation of molecular function	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000406	Rho_GDI	52	236

External Links

No external refs found!

AT3G07880 (SCN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation