1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G12330

AT1G12330


Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).


Gene families : OG0003759 (Archaeplastida) Phylogenetic Tree(s): OG0003759_tree ,
OG_05_0002804 (LandPlants) Phylogenetic Tree(s): OG_05_0002804_tree ,
OG_06_0011467 (SeedPlants) Phylogenetic Tree(s): OG_06_0011467_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12330
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00096700 evm_27.TU.AmTr_v1... IRK-interacting protein OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01004907001 No alias No description available 0.04 Archaeplastida
GSVIVT01025319001 No alias IRK-interacting protein OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g14500.1 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os09g31370.1 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_9461665g0010 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.1 Archaeplastida
Solyc08g079510.3.1 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001041_P001 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e024380_P001 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006516 glycoprotein catabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009553 embryo sac development IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
CC GO:0010169 thioglucosidase complex IEP Neighborhood
MF GO:0010180 thioglucosidase binding IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
BP GO:0010430 fatty acid omega-oxidation IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0015245 fatty acid transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
CC GO:0030139 endocytic vesicle IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
MF GO:0046593 mandelonitrile lyase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0080051 cutin transport IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0080172 petal epidermis patterning IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000033 regulation of seed dormancy process IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!