Zm00001e001999_P001


Description : 6-phosphogluconolactonase


Gene families : OG0001644 (Archaeplastida) Phylogenetic Tree(s): OG0001644_tree ,
OG_05_0002132 (LandPlants) Phylogenetic Tree(s): OG_05_0002132_tree ,
OG_06_0001576 (SeedPlants) Phylogenetic Tree(s): OG_06_0001576_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001999_P001
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00087930 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.03 Archaeplastida
AT3G49360 PGL2 6-phosphogluconolactonase 2 0.06 Archaeplastida
AT5G24400 EMB2024, PGL3 NagB/RpiA/CoA transferase-like superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00021281.39 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.01 Archaeplastida
LOC_Os03g30300.1 No alias 6-phosphogluconolactonase 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR006148 Glc/Gal-6P_isomerase 22 265
No external refs found!