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  5. AT3G08800

AT3G08800


Description : ARM repeat superfamily protein


Gene families : OG0004611 (Archaeplastida) Phylogenetic Tree(s): OG0004611_tree ,
OG_05_0003578 (LandPlants) Phylogenetic Tree(s): OG_05_0003578_tree ,
OG_06_0003169 (SeedPlants) Phylogenetic Tree(s): OG_06_0003169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G08800
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Mp4g11530.1 No alias component DSP3 of DSP snRNA processing complex. SIEL... 0.02 Archaeplastida
Smo439432 No alias Protein translocation.plasmodesmata intercellular... 0.02 Archaeplastida
Solyc01g090260.5.1.1 No alias component DSP3 of DSP snRNA processing complex. SIEL... 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
BP GO:0010496 intercellular transport IMP Interproscan
BP GO:0090057 root radial pattern formation IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000791 euchromatin IEP Neighborhood
CC GO:0000795 synaptonemal complex IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006029 proteoglycan metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006268 DNA unwinding involved in DNA replication IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006493 protein O-linked glycosylation IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009903 chloroplast avoidance movement IEP Neighborhood
BP GO:0009904 chloroplast accumulation movement IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010018 far-red light signaling pathway IEP Neighborhood
BP GO:0010384 cell wall proteoglycan metabolic process IEP Neighborhood
BP GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process IEP Neighborhood
BP GO:0010405 arabinogalactan protein metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0018258 protein O-linked glycosylation via hydroxyproline IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032392 DNA geometric change IEP Neighborhood
BP GO:0032508 DNA duplex unwinding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035250 UDP-galactosyltransferase activity IEP Neighborhood
BP GO:0042753 positive regulation of circadian rhythm IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071490 cellular response to far red light IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
CC GO:0099086 synaptonemal structure IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!