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  5. Zm00001e002338_P001

Zm00001e002338_P001


Description : Expansin-B2 OS=Oryza sativa subsp. japonica (sp|o24230|expb2_orysj : 369.0)


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0066703 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0060419 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002338_P001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 Archaeplastida
Gb_10705 No alias Expansin-like A2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g42650.1 No alias beta-class expansin 0.02 Archaeplastida
LOC_Os02g44106.1 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g01610.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os03g01640.1 No alias Expansin-B10 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os03g01650.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g46630.1 No alias Expansin-B15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os05g15690.1 No alias Expansin-B18 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os10g40730.1 No alias Expansin-B4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_166764g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_78155g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c17_12980V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.03 Archaeplastida
Smo234188 No alias Expansin-B16 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc05g052330.3.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e023169_P003 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e036860_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e037885_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e037919_P001 No alias Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 482.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 83 164
IPR007117 Expansin_CBD 177 257
No external refs found!