Zm00001e002346_P001

Description : no hits & (original description: none)

Gene families : OG0006074 (Archaeplastida) Phylogenetic Tree(s): OG0006074_tree ,
OG_05_0006640 (LandPlants) Phylogenetic Tree(s): OG_05_0006640_tree ,
OG_06_0010103 (SeedPlants) Phylogenetic Tree(s): OG_06_0010103_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e002346_P001
Cluster	HCCA: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os10g40650.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp5g24470.1	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008649	rRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005227	YqgF	74	206

External Links

No external refs found!