Zm00001e002511_P002


Description : proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex


Gene families : OG0002435 (Archaeplastida) Phylogenetic Tree(s): OG0002435_tree ,
OG_05_0006809 (LandPlants) Phylogenetic Tree(s): OG_05_0006809_tree ,
OG_06_0009933 (SeedPlants) Phylogenetic Tree(s): OG_06_0009933_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002511_P002
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00043000 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
AT5G45390 NCLPP4, CLPP4 CLP protease P4 0.08 Archaeplastida
Cre12.g500950 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01020796001 No alias Protein degradation.peptidase families.serine-type... 0.11 Archaeplastida
Gb_05917 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
LOC_Os01g32350.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
LOC_Os10g43050.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.08 Archaeplastida
MA_140852g0010 No alias ATP-dependent Clp protease proteolytic subunit 4,... 0.02 Archaeplastida
MA_159916g0010 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.03 Archaeplastida
MA_164820g0010 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.03 Archaeplastida
MA_8327173g0010 No alias ATP-dependent Clp protease proteolytic subunit 3,... 0.02 Archaeplastida
Mp1g12460.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
Mp3g07790.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
Pp3c16_20770V3.1 No alias CLP protease P4 0.04 Archaeplastida
Solyc02g091280.3.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.06 Archaeplastida
Solyc08g075750.4.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008837 diaminopimelate epimerase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0047661 amino-acid racemase activity IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 74 248
No external refs found!