Zm00001e002683_P002


Description : deubiquitinase (UBP5|8-11)


Gene families : OG0002002 (Archaeplastida) Phylogenetic Tree(s): OG0002002_tree ,
OG_05_0001858 (LandPlants) Phylogenetic Tree(s): OG_05_0001858_tree ,
OG_06_0001444 (SeedPlants) Phylogenetic Tree(s): OG_06_0001444_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002683_P002
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G32850 UBP11 ubiquitin-specific protease 11 0.02 Archaeplastida
AT4G10590 UBP10 ubiquitin-specific protease 10 0.03 Archaeplastida
GSVIVT01019677001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Gb_11501 No alias deubiquitinase (UBP5|8-11) 0.03 Archaeplastida
MA_10436012g0010 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
MA_11753g0010 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
Mp3g14190.1 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
Smo61965 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
Solyc08g083300.4.1 No alias deubiquitinase (UBP5|8-11) 0.04 Archaeplastida
Zm00001e008908_P001 No alias deubiquitinase (UBP5|8-11) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 313 910
IPR006615 Pept_C19_DUSP 41 137
No external refs found!