1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e002891_P001

Zm00001e002891_P001


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0001404 (SeedPlants) Phylogenetic Tree(s): OG_06_0001404_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002891_P001
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.08 Archaeplastida
AT1G11370 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT3G17060 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G07410 No alias Pectin lyase-like superfamily protein 0.11 Archaeplastida
AT5G07420 No alias Pectin lyase-like superfamily protein 0.09 Archaeplastida
AT5G07430 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G19730 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01013827001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015022001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.02 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os03g19610.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os07g41650.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g43830.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.15 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.13 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.09 Archaeplastida
MA_10267810g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_10434773g0030 No alias pectin methylesterase 0.04 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.05 Archaeplastida
Pp3c10_19460V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c25_760V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12660V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c5_12770V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc01g109740.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc05g052110.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc05g052120.4.1 No alias No annotation 0.02 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e035522_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 99 396
No external refs found!