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  5. Zm00001e003057_P001

Zm00001e003057_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003057_P001
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00104280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.1 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT2G37430 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT3G19580 AZF2, ZF2 zinc-finger protein 2 0.04 Archaeplastida
AT3G46080 No alias C2H2-type zinc finger family protein 0.07 Archaeplastida
AT3G46090 ZAT7 C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.01 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.02 Archaeplastida
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.05 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.03 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.07 Archaeplastida
AT5G67450 AZF1, ZF1 zinc-finger protein 1 0.03 Archaeplastida
GSVIVT01033678001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_10422 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_10423 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_16414 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_16419 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g41390.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os03g60540.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g60560.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os03g60570.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g02390.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_178315g0010 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_23050g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_837209g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc04g077980.1.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Solyc06g074800.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc12g088390.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc12g088400.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e011755_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e019349_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e019350_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e029605_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!