Zm00001e003059_P001


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001215 (LandPlants) Phylogenetic Tree(s): OG_05_0001215_tree ,
OG_06_0001435 (SeedPlants) Phylogenetic Tree(s): OG_06_0001435_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003059_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G04340 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Archaeplastida
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre17.g738150 No alias CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01030477001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.06 Archaeplastida
LOC_Os01g72210.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
LOC_Os10g42820.1 No alias calcium-permeable channel (OSCA) 0.06 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Pp3c1_13840V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Pp3c9_16680V3.1 No alias hypothetical protein 1 0.02 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 153
IPR003864 RSN1_7TM 340 604
IPR027815 PHM7_cyt 174 327
No external refs found!