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  5. Zm00001e003105_P001

Zm00001e003105_P001


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 272.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003105_P001
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT3G51930 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
LOC_Os01g13140.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g068250.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 352 382
IPR001680 WD40_repeat 393 439
IPR001680 WD40_repeat 246 282
No external refs found!