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  5. Zm00001e003145_P004

Zm00001e003145_P004


Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 310.0)


Gene families : OG0001697 (Archaeplastida) Phylogenetic Tree(s): OG0001697_tree ,
OG_05_0001748 (LandPlants) Phylogenetic Tree(s): OG_05_0001748_tree ,
OG_06_0003559 (SeedPlants) Phylogenetic Tree(s): OG_06_0003559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003145_P004
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00195630 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein PEPPER... 0.02 Archaeplastida
AMTR_s00002p00263460 evm_27.TU.AmTr_v1... Flowering locus K homology domain OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G04610 FLK RNA-binding KH domain-containing protein 0.03 Archaeplastida
GSVIVT01029319001 No alias RNA-binding KH domain-containing protein PEPPER... 0.02 Archaeplastida
Gb_12788 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Gb_19266 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Gb_28050 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g42900.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os10g41440.1 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 Archaeplastida
MA_10428218g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
MA_10431753g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.05 Archaeplastida
Mp7g17380.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Pp3c14_5750V3.1 No alias RNA-binding KH domain-containing protein 0.05 Archaeplastida
Solyc01g097010.3.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 Archaeplastida
Solyc06g084000.4.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g008490.4.1 No alias RNA-binding KH domain-containing protein PEPPER... 0.04 Archaeplastida
Solyc09g066120.4.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 393 454
IPR004088 KH_dom_type_1 211 276
IPR004088 KH_dom_type_1 119 170
No external refs found!