AT3G09790 (UBQ8)

Aliases : UBQ8

Description : ubiquitin 8

Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree ,
OG_06_0000425 (SeedPlants) Phylogenetic Tree(s): OG_06_0000425_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT3G09790
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.01 Archaeplastida
LOC_Os08g08760.1 No alias Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005622 intracellular TAS Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0006464 cellular protein modification process ISS Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 471 548
IPR000626 Ubiquitin_dom 81 151
IPR000626 Ubiquitin_dom 554 625
IPR000626 Ubiquitin_dom 321 392
IPR000626 Ubiquitin_dom 395 464
IPR000626 Ubiquitin_dom 8 76
IPR000626 Ubiquitin_dom 157 235
IPR000626 Ubiquitin_dom 240 315
No external refs found!