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  5. Zm00001e003226_P004

Zm00001e003226_P004


Description : transcription factor (HD-ZIP III)


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree ,
OG_06_0060779 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003226_P004
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00148p00033940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_18240 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
LOC_Os03g01890.1 No alias transcription factor (HD-ZIP III) 0.08 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.06 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
MA_107764g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Pp3c16_15450V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Archaeplastida
Pp3c4_5300V3.1 No alias homeobox gene 8 0.04 Archaeplastida
Smo270225 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Smo77000 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc02g024070.3.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Solyc03g120910.4.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Solyc12g044410.2.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 24 81
IPR002913 START_lipid-bd_dom 173 380
IPR013978 MEKHLA 710 853
No external refs found!