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  5. Zm00001e003316_P001

Zm00001e003316_P001


Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree ,
OG_06_0001149 (SeedPlants) Phylogenetic Tree(s): OG_06_0001149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003316_P001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00073410 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 6, chloroplastic... 0.03 Archaeplastida
AT5G19030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
GSVIVT01036082001 No alias Small RNA-binding protein 11, chloroplastic... 0.03 Archaeplastida
LOC_Os03g46770.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
MA_10435321g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Solyc07g049270.4.1 No alias Glycine-rich RNA-binding protein 4, mitochondrial... 0.1 Archaeplastida
Solyc09g011210.4.1 No alias Organelle RRM domain-containing protein 6, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!