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  5. Zm00001e003411_P001

Zm00001e003411_P001


Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 102.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0020738 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003411_P001
Cluster HCCA: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_06048 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_30381 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.02 Archaeplastida
LOC_Os01g74040.1 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.02 Archaeplastida
LOC_Os02g49550.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
LOC_Os03g16480.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.02 Archaeplastida
LOC_Os06g01200.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
LOC_Os06g42700.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os08g36170.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g38060.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g17610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_110029g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
MA_126211g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g009000.3.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida
Solyc03g098590.3.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.06 Archaeplastida
Solyc07g007170.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038273_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 257 300
No external refs found!