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  5. Zm00001e003438_P003

Zm00001e003438_P003


Description : Protein RAFTIN 1A OS=Triticum aestivum (sp|q70kg5|raf1a_wheat : 308.0)


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0015464 (SeedPlants) Phylogenetic Tree(s): OG_06_0015464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003438_P003
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00190970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00059p00191030 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G60390 PG1 polygalacturonase 1 0.03 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.04 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01035702001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01410 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_18274 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Gb_24161 No alias BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_34428 No alias BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_34429 No alias BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g53240.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os08g38810.1 No alias BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os09g16010.1 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
MA_10428132g0010 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_183840g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_185772g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_196669g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_2153472g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_577011g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5913418g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_6690V3.1 No alias polygalacturonase 1 0.04 Archaeplastida
Pp3c4_21630V3.1 No alias polygalacturonase 1 0.04 Archaeplastida
Solyc02g062300.3.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g062320.3.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc05g005560.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e003182_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003891_P006 No alias BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 261 476
No external refs found!