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  5. Zm00001e003546_P002

Zm00001e003546_P002


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003546_P002
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 Archaeplastida
GSVIVT01008556001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.06 Archaeplastida
GSVIVT01014302001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
GSVIVT01021087001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_27198 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_32703 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.1 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.07 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g018780.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g078700.3.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e034628_P001 No alias transcription factor (SBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 83 157
No external refs found!