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  5. Zm00001e003598_P001

Zm00001e003598_P001


Description : Pumilio homolog 5 OS=Arabidopsis thaliana (sp|q9ljx4|pum5_arath : 609.0)


Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0000342 (LandPlants) Phylogenetic Tree(s): OG_05_0000342_tree ,
OG_06_0004029 (SeedPlants) Phylogenetic Tree(s): OG_06_0004029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003598_P001
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g01910.1 No alias Pumilio homolog 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 780 809
IPR001313 Pumilio_RNA-bd_rpt 969 1000
IPR001313 Pumilio_RNA-bd_rpt 925 957
IPR001313 Pumilio_RNA-bd_rpt 708 740
IPR001313 Pumilio_RNA-bd_rpt 744 776
IPR001313 Pumilio_RNA-bd_rpt 817 842
IPR001313 Pumilio_RNA-bd_rpt 852 879
No external refs found!