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AT3G10190


Description : Calcium-binding EF-hand family protein


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0013975 (LandPlants) Phylogenetic Tree(s): OG_05_0013975_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10190
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G41110 ATCAL5, CAM2 calmodulin 2 0.04 Archaeplastida
GSVIVT01029852001 No alias Calcium-binding allergen Bet v 3 OS=Betula pendula 0.04 Archaeplastida
GSVIVT01038234001 No alias RNA processing.messenger ribonucleoprotein particle... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004163 diphosphomevalonate decarboxylase activity IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006722 triterpenoid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
CC GO:0010370 perinucleolar chromocenter IEP Neighborhood
BP GO:0016104 triterpenoid biosynthetic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP Neighborhood
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 71 129
IPR002048 EF_hand_dom 143 205
No external refs found!