Zm00001e003902_P001


Description : large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003902_P001
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g32770.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.02 Archaeplastida
Smo137874 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Solyc00g500063.1.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Zm00001e042029_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Zm00001e042051_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Zm00001e042083_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Zm00001e042095_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Zm00001e042403_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000685 RuBisCO_lsu_C 161 469
IPR017443 RuBisCO_lsu_fd_N 31 151
No external refs found!