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  5. Zm00001e003962_P001

Zm00001e003962_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003962_P001
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT4G17810 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_21168 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os04g36650.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26210.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g061160.1.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!