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  5. Zm00001e003968_P002

Zm00001e003968_P002


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003968_P002
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01009680001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01010283001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01025166001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031112001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_18885 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_41434 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_10426334g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10430137g0020 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
MA_10431498g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_26324g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c1_16920V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.01 Archaeplastida
Pp3c2_20240V3.1 No alias indeterminate(ID)-domain 2 0.02 Archaeplastida
Pp3c2_22070V3.1 No alias C2H2-like zinc finger protein 0.01 Archaeplastida
Solyc06g062670.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g074780.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 199 221
No external refs found!