Zm00001e003992_P005


Description : no hits & (original description: none)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0009485 (LandPlants) Phylogenetic Tree(s): OG_05_0009485_tree ,
OG_06_0007059 (SeedPlants) Phylogenetic Tree(s): OG_06_0007059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003992_P005
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00054750 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.18 Archaeplastida
AT2G16730 BGAL13 glycosyl hydrolase family 35 protein 0.06 Archaeplastida
AT4G35010 BGAL11 beta-galactosidase 11 0.13 Archaeplastida
AT5G63810 BGAL10 beta-galactosidase 10 0.02 Archaeplastida
GSVIVT01008835001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01009791001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01018853001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01022353001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01024031001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Gb_12091 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Gb_40554 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Gb_41532 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os01g39830.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os02g12730.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os03g06940.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os06g42310.1 No alias beta-galactosidase (BGAL) 0.12 Archaeplastida
LOC_Os08g43570.1 No alias beta-galactosidase (BGAL) 0.09 Archaeplastida
LOC_Os09g36810.1 No alias beta-galactosidase (BGAL) 0.09 Archaeplastida
MA_10427427g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_10429233g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436863g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10437013g0010 No alias Beta-galactosidase 15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_11388g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_168609g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_665188g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_87238g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Smo269483 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
Solyc01g111540.4.1 No alias beta-galactosidase (BGAL) 0.06 Archaeplastida
Solyc02g078950.4.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc02g084720.3.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc03g019890.3.1 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc06g062580.3.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc07g042220.2.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc10g055470.2.1 No alias beta-galactosidase (BGAL) 0.14 Archaeplastida
Zm00001e000496_P002 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e013679_P001 No alias Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Zm00001e024694_P002 No alias beta-galactosidase (BGAL) 0.07 Archaeplastida
Zm00001e035986_P002 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e037281_P001 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e039014_P001 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!