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  5. Zm00001e003996_P001

Zm00001e003996_P001


Description : component NDC80 of NDC80 outer kinetochore complex


Gene families : OG0002464 (Archaeplastida) Phylogenetic Tree(s): OG0002464_tree ,
OG_05_0002250 (LandPlants) Phylogenetic Tree(s): OG_05_0002250_tree ,
OG_06_0001822 (SeedPlants) Phylogenetic Tree(s): OG_06_0001822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003996_P001
Cluster HCCA: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00253530 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.05 Archaeplastida
Cpa|evm.model.tig00021621.13 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 Archaeplastida
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 Archaeplastida
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.05 Archaeplastida
MA_180359g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.02 Archaeplastida
Pp3c7_8870V3.1 No alias No annotation 0.06 Archaeplastida
Solyc01g104570.4.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 89 160
No external refs found!