AT3G10595

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000767 (LandPlants) Phylogenetic Tree(s): OG_05_0000767_tree ,
OG_06_0000381 (SeedPlants) Phylogenetic Tree(s): OG_06_0000381_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G10595
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00096080	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT1G19510	RL5, RSM4, ATRL5	RAD-like 5	0.05	Archaeplastida
AT3G10580	No alias	Homeodomain-like superfamily protein	0.05	Archaeplastida
AT3G10585	No alias	Homeodomain-like superfamily protein	0.04	Archaeplastida
AT4G09450	No alias	Duplicated homeodomain-like superfamily protein	0.09	Archaeplastida
GSVIVT01035363001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
MA_41803g0010	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
MA_6532729g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
Solyc05g013420.1.1	No alias	transcription factor (MYB-related)	0.03	Archaeplastida
Solyc06g071230.3.1	No alias	transcription factor (MYB-related)	0.01	Archaeplastida
Solyc07g026680.2.1	No alias	transcription factor (MYB-related)	0.01	Archaeplastida
Zm00001e019254_P001	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
Zm00001e028675_P001	No alias	transcription factor (MYB-related)	0.02	Archaeplastida
Zm00001e031755_P001	No alias	transcription factor (MYB-related)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0009008	DNA-methyltransferase activity	IEP	Neighborhood
BP	GO:0009559	embryo sac central cell differentiation	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0015386	potassium:proton antiporter activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0022821	potassium ion antiporter activity	IEP	Neighborhood
CC	GO:0043076	megasporocyte nucleus	IEP	Neighborhood
CC	GO:0043078	polar nucleus	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Neighborhood
BP	GO:1905428	regulation of plant organ formation	IEP	Neighborhood
BP	GO:2000032	regulation of secondary shoot formation	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G10595

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation