Description : component RPL34 of LSU proteome component
Gene families : OG0001700 (Archaeplastida) Phylogenetic Tree(s): OG0001700_tree ,
OG_05_0001610 (LandPlants) Phylogenetic Tree(s): OG_05_0001610_tree ,
OG_06_0002125 (SeedPlants) Phylogenetic Tree(s): OG_06_0002125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e004116_P001 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00260490 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
AMTR_s00010p00260730 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
AT1G26880 | No alias | Ribosomal protein L34e superfamily protein | 0.28 | Archaeplastida | |
AT1G69620 | RPL34 | ribosomal protein L34 | 0.27 | Archaeplastida | |
AT3G28900 | No alias | Ribosomal protein L34e superfamily protein | 0.27 | Archaeplastida | |
Cpa|evm.model.tig00000632.3 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
Cre16.g661050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.3 | Archaeplastida | |
GSVIVT01011419001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
GSVIVT01019985001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | Archaeplastida | |
Gb_36060 | No alias | component RPL34 of LSU proteome component | 0.09 | Archaeplastida | |
LOC_Os08g06040.1 | No alias | component RPL34 of LSU proteome component | 0.37 | Archaeplastida | |
LOC_Os08g33920.1 | No alias | component RPL34 of LSU proteome component | 0.22 | Archaeplastida | |
LOC_Os09g24690.1 | No alias | component RPL34 of LSU proteome component | 0.3 | Archaeplastida | |
MA_109553g0010 | No alias | component RPL34 of LSU proteome component | 0.15 | Archaeplastida | |
MA_175574g0010 | No alias | component RPL34 of LSU proteome component | 0.12 | Archaeplastida | |
MA_7581523g0010 | No alias | component RPL34 of LSU proteome component | 0.15 | Archaeplastida | |
Mp4g17040.1 | No alias | component RPL34 of LSU proteome component | 0.35 | Archaeplastida | |
Pp3c11_2940V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.25 | Archaeplastida | |
Pp3c11_3090V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.07 | Archaeplastida | |
Pp3c1_1800V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.22 | Archaeplastida | |
Pp3c25_11980V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.25 | Archaeplastida | |
Pp3c2_34570V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.11 | Archaeplastida | |
Pp3c7_21380V3.1 | No alias | Ribosomal protein L34e superfamily protein | 0.22 | Archaeplastida | |
Smo113433 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
Solyc02g087930.3.1 | No alias | component RPL34 of LSU proteome component | 0.06 | Archaeplastida | |
Solyc05g007560.3.1 | No alias | component RPL34 of LSU proteome component | 0.24 | Archaeplastida | |
Solyc06g069860.4.1 | No alias | component RPL34 of LSU proteome component | 0.33 | Archaeplastida | |
Zm00001e022460_P001 | No alias | component RPL34 of LSU proteome component | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0004017 | adenylate kinase activity | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006553 | lysine metabolic process | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Neighborhood |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009085 | lysine biosynthetic process | IEP | Neighborhood |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Neighborhood |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Neighborhood |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Neighborhood |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008195 | Ribosomal_L34Ae | 1 | 96 |
No external refs found! |