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  5. Zm00001e004125_P001

Zm00001e004125_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0069485 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0063384 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004125_P001
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00192390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.11 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.06 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.04 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.13 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
LOC_Os03g55760.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.09 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g33050.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.12 Archaeplastida
LOC_Os09g12770.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_21538g0020 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_8865g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c22_8210V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Smo417629 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc04g079600.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e007231_P002 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Zm00001e013199_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 323 365
No external refs found!