Zm00001e004226_P001

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0015455 (SeedPlants) Phylogenetic Tree(s): OG_06_0015455_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e004226_P001
Cluster	HCCA: Cluster_335

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00214750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01020033001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
MA_130615g0020	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Mp3g02320.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c3_37710V3.1	No alias	homeobox 3	0.04	Archaeplastida
Pp3c8_440V3.1	No alias	homeobox 3	0.03	Archaeplastida
Smo19476	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Solyc03g034120.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006541	glutamine metabolic process	IEP	Neighborhood
BP	GO:0006542	glutamine biosynthetic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
MF	GO:0016211	ammonia ligase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	77	130
IPR003106	Leu_zip_homeo	132	174

External Links

No external refs found!

Zm00001e004226_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation