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  5. Zm00001e004300_P003

Zm00001e004300_P003


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004300_P003
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00095620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g25799.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
BP GO:0018142 protein-DNA covalent cross-linking IEP Neighborhood
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 142 187
IPR001005 SANT/Myb 50 100
No external refs found!